- Processing single-cell data in 10X Genomics on the Cloud | YouTube
- Bioinformatic Notebook | GitHub
- Behind the Scenes in Multiome Data Analysis in Neuroscience | YouTube
- Multiome Slides | SpeakerDeck
- Transcriptomics in Arabidopsis | Youtube
Processing single-cell data in 10X Genomics on the Cloud | YouTube
The serie brings together short snapshots focused on Processing raw single-cell data (fastq) using Cell Ranger from 10X Genomics on the Cloud.
The material come from internal talks supporting the Single-Cell RNA-seq Workshop.
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Bioinformatic Notebook | GitHub
A growing collection containing links to papers, workflows, conceptual maps, and insights for scRNA-seq, scATAC-seq, multiome, and Spatial transcriptomics.
Behind the Scenes in Multiome Data Analysis in Neuroscience | YouTube
Playlist featuring walkthroughs of my work in LIEBER working with the human habenula. We discuss the data processing pipelines, data-driven discussions, and insights from the analyses. We cover topics such as single-nucleus RNA-seq, snATAC-seq multiome pipelines.
Thanks to PhD Collado who compiled, edited and allocated all these recordings.
Follow the full playlist: Youtube
Multiome Slides | SpeakerDeck
Title: LIEBER - Slides for talks
Spatial transcriptomics and multiomics. Material used for internal talks, the R-StatClub and conferences. SpeakerDeck
Transcriptomics in Arabidopsis | Youtube
Title: CICY – Arabidopsis Pathogenesis
Compiles a set of talks and presentations in which I discussed topics in molecular biology, plant genetics, and transcriptomic analysis in Arabidopsis thaliana. YouTube Playlist